#code-mcp

MCP server and Claude Plugin for a full ENCODE Project genomic data and analysis toolkit — search, download, track, and analyze functional genomics experiments Search ENCODE, cross-reference 14 databases, run 7 analysis pipelines, and generate publication-ready methods — all from natural language in Claude Code. Start from ENCODE but go everywhere: discover histone peaks, cross-reference with GWAS variants, check ClinVar pathogenicity, pull GTEx expression, analyze TF binding motifs from JASPAR, run pipelines, and generate publication-ready methods with full provenance — in one conversation.

WooCommerce MCP Server Plugin (no external server needed): Connect your WooCommerce store to AI assistants like Claude and VS Code. This WordPress plugin enables AI clients to access your store's product catalog, categories, reviews, and content through a secure, read-only interface. MCP for WooCommerce transforms your WordPress site into an AI-accessible data source built on Automattic's official WordPress MCP. It safely exposes public store information—products, categories, tags, reviews, shipping options, and WordPress content—while protecting customer data and private details. Perfect for building AI-powered shopping assistants or integrating with custom AI applications.

Reusable MCP server setup to augment AI coding agents with specific repo guidelines