BioMCP: Biomedical Model Context Protocol

Created By

genomoncologya year ago

BioMCP: Biomedical Model Context Protocol

# bioinformatics

Overview Content Tools Comments

Overview

What is BioMCP?

BioMCP is an open-source toolkit designed for biomedical research AI assistants and agents, facilitating the search and retrieval of clinical trials, PubMed articles, and genomic variants.

How to use BioMCP?

To use BioMCP, install it via the Python package biomcp-python or through the Smithery CLI for Claude Desktop users. You can also run commands directly without installation using the uv command.

Key features of BioMCP?

Search and retrieve clinical trials and PubMed articles.
Access genomic variant information from multiple databases.
Comprehensive command-line interface for direct interaction with biomedical databases.

Use cases of BioMCP?

Researchers can find relevant clinical trials for specific conditions.
Medical professionals can access the latest PubMed articles for their field.
Geneticists can search for genomic variants and their annotations.

FAQ from BioMCP?

Is BioMCP free to use?

Yes! BioMCP is open-source and free to use under the MIT License.

What databases does BioMCP integrate with?

BioMCP integrates with PubMed, ClinicalTrials.gov, and MyVariant.info for comprehensive biomedical data access.

Can I use BioMCP for commercial purposes?

While BioMCP is free, users must comply with the individual terms of service for each data source, especially for commercial applications.

Project Info

Created At

a year ago

Updated At

a year ago

Author Name

genomoncology

Star

139

Language

Python

License

MIT license

Category

research-and-data

Tags

Homepage

https://github.com/genomoncology/biomcp

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