Liana-MCP

Created By
scmcphuba year ago
MCP server for cell–cell communication using liana
Overview

What is Liana-MCP?

Liana-MCP is a natural language interface designed for single-cell RNA sequencing (scRNA-Seq) analysis, enabling users to perform cell-cell communication analysis using Liana through the MCP framework.

How to use Liana-MCP?

To use Liana-MCP, install it via PyPI with the command pip install Liana-mcp, and run it locally or remotely as per the provided configuration instructions in your MCP client.

Key features of Liana-MCP?

  • Input/output module for reading and writing scRNA-Seq data.
  • Methods for analyzing cell-cell communication.
  • Plotting capabilities including circle plots and dot plots.

Use cases of Liana-MCP?

  1. Performing scRNA-Seq analysis using natural language queries.
  2. Integrating Liana's functions into AI clients and agent frameworks.
  3. Visualizing cell cluster analysis results in various formats.

FAQ from Liana-MCP?

  • Who can use Liana-MCP?

Anyone interested in scRNA-Seq analysis, including researchers and developers looking to integrate its functionalities into their applications.

  • How do I run Liana-MCP?

You can run it locally or remotely by following the installation and configuration instructions provided in the documentation.

  • Is Liana-MCP open for contributions?

Yes! Contributions to the code are welcome, and users can submit issues or contact the author for questions.

Project Info
Created At
a year ago
Updated At
a year ago
Author Name
scmcphub
Star
0
Language
Python
License
-

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